taxon	lfc_(Intercept)	lfc_GroupL. rhamnosus TX	se_(Intercept)	se_GroupL. rhamnosus TX	W_(Intercept)	W_GroupL. rhamnosus TX	p_(Intercept)	p_GroupL. rhamnosus TX	q_(Intercept)	q_GroupL. rhamnosus TX	diff_(Intercept)	diff_GroupL. rhamnosus TX
Staphylococcus saprophyticus (SP10) 	2.23281675929047	-4.54409568741718	0.567954522304575	0.871597155770502	3.93133018860459	-5.21352743906117	8.44771549856404e-05	1.85283108988915e-07	0.00473072067919586	1.03758541033792e-05	TRUE	TRUE
Triticum aestivum (SP12) 	-1.01718773625236	1.95591330366849	1.55871367679214	2.26294374838378	-0.652581517309681	0.864322546711746	0.514026104240961	0.387410727721696	1	1	FALSE	FALSE
Corynebacterium stationis (SP14) 	3.10801348569674	-6.29448914022971	0.573953506885033	0.880006731213502	5.41509625503394	-7.15277385611563	6.12557441571759e-08	8.50416434513883e-13	3.73660039358773e-06	5.18754025053469e-11	TRUE	TRUE
Stenotrophomonas maltophilia (SP17) 	0.252160003160933	-0.582782175158101	0.794347116285363	1.18860990979027	0.317443090043707	-0.49030566745059	0.750907415475329	0.623917617185013	1	1	FALSE	FALSE
Cutibacterium acnes (SP18) 	-0.657386631618401	1.23631109440057	0.901434252507054	1.3387048568445	-0.729267419992182	0.923512817690606	0.46583809738008	0.355740023823622	1	1	FALSE	FALSE
Ligilactobacillus murinus (SP2) 	-5.15171875977731	10.2249753507184	0.791558240957384	1.18470318029783	-6.50832559527943	8.63083303967148	7.59930679214735e-11	6.09067356243116e-18	4.71157021113136e-09	3.77621760870732e-16	TRUE	TRUE
Lachnospiraceae_[G-11] bacterium_MOT-177 (SP23) 	0.580672190333794	-1.23980654950382	0.854929881551775	1.27350300447445	0.679204462101409	-0.973540341206708	0.497008320440112	0.330284820591191	1	1	FALSE	FALSE
Ligilactobacillus animalis (SP24) 	5.19324848338319	-10.4649591356026	0.458329009865158	0.717171634117101	11.3308308477159	-14.5919869634636	9.23247740123529e-30	3.15862321200954e-48	5.81646076277823e-28	1.98993262356601e-46	TRUE	TRUE
Mammaliicoccus lentus (SP25) 	3.56100977885301	-7.20048172654226	1.03715270189301	1.52916720595966	3.43344791210925	-4.70876023137279	0.000595956697944522	2.49228030256958e-06	0.0321816616890042	0.000134583136338757	TRUE	TRUE
Lachnospiraceae_[G-14] bacterium_MOT-185 (SP26) 	0.503542477141476	-1.08554712311919	1.04771699899462	1.54400316954384	0.480609246222664	-0.703073118327795	0.630794242697127	0.482010183672173	1	1	FALSE	FALSE
Corynebacterium ammoniagenes (SP27) 	2.82948410944855	-5.73743038773334	0.593134381557319	0.906883851942864	4.7703930128271	-6.3265327477623	1.838668234541e-06	2.50731108589063e-10	0.00011032009407246	1.50438665153438e-08	TRUE	TRUE
Streptococcus thermophilus (SP28) 	-0.0389293362007631	-0.00060349643470924	0.587246709043908	0.89863537945047	-0.0662912803106954	-0.000671569858598587	0.947145925259679	0.999464164818601	1	1	FALSE	FALSE
Actinidia eriantha (SP39) 	-0.202017326839593	0.325572484842951	0.987572449884633	1.4595586252259	-0.204559500280908	0.223062286924282	0.837916300309151	0.823487029539002	1	1	FALSE	FALSE
Enterococcus gallinarum (SP40) 	-2.11693197838619	4.15540178793615	1.14608569702875	1.68221199708813	-1.84709745865809	2.47020101814102	0.0647330167559856	0.0135037146529049	1	0.58065973007491	FALSE	FALSE
Mollicutes_[G-1] bacterium_MOT-186 (SP42) 	0.504970086006264	-1.08840234084876	0.957008625453411	1.41666486734989	0.527654686254285	-0.768284981108343	0.597739029488253	0.442317895423607	1	1	FALSE	FALSE
Atopostipes sp._MOT-201 (SP45) 	1.99748365051587	-4.07342946986797	0.509059335257444	0.788881631388869	3.92387195788422	-5.1635496477418	8.71370601867469e-05	2.42310273941316e-07	0.00479253831027108	1.33270650667724e-05	TRUE	TRUE
Enterococcus faecalis (SP47) 	-2.77289287514728	5.46732358145832	0.859988528170633	1.28059397413788	-3.22433705138576	4.26936538190338	0.00126264691907929	1.96029918624491e-05	0.0669202867112022	0.0010389585687098	FALSE	TRUE
Pelomonas saccharophila (SP49) 	-0.808732253228044	1.53900233761985	0.65212679884148	0.989484971706125	-1.24014571194556	1.55535696006198	0.214921503876004	0.119861078570365	1	1	FALSE	FALSE
Limosilactobacillus reuteri (SP51) 	1.19540429132038	-2.469270751477	0.719894941237035	1.08434832518454	1.66052603351574	-2.27719330968373	0.0968086751262501	0.0227746844855034	1	0.865235645763813	FALSE	FALSE
Clostridium disporicum (SP53) 	0.242200987241284	-0.562864143318804	1.00167958782231	1.47936112825592	0.241794871519582	-0.380477851261637	0.808939112957827	0.703590734669179	1	1	FALSE	FALSE
Lactobacillus johnsonii (SP56) 	1.79597169289337	-3.67040555462298	0.905411921035827	1.34428326163892	1.9835962517908	-2.73038105834042	0.0473008673951254	0.00632611562346886	1	0.302657011508608	FALSE	FALSE
Staphylococcus equorum (SP65) 	3.48777660590442	-7.05401538064507	0.841999836028167	1.25537999701695	4.14225330774025	-5.61902802132176	3.43910200345847e-05	1.9203471297846e-08	0.00199467916200591	1.11380133527507e-06	TRUE	TRUE
Pseudomonas helleri (SP68) 	-0.292826723306591	0.507191277776946	0.47905006629986	0.746544090160071	-0.611265385199418	0.679385564043774	0.541023902905985	0.496893594302132	1	1	FALSE	FALSE
Jeotgalicoccus halotolerans (SP7) 	3.15262400639982	-6.38371018163588	0.763722781830402	1.145716171604	4.12796905029333	-5.57180769535504	3.65981358721204e-05	2.52109618264644e-08	0.00208609374471086	1.43702482410847e-06	TRUE	TRUE
Stenotrophomonas [Pseudomonas] hibiscicola (SP70) 	-0.701003301308115	1.32354443377999	0.730444405999441	1.09911791617177	-0.959694256743547	1.20418784400304	0.337209114636626	0.228516983301391	1	1	FALSE	FALSE
Dubosiella newyorkensis (SP73) 	1.87066270152095	-3.81978757187815	1.12892552856695	1.65809376541433	1.65702932052176	-2.30372229336719	0.0975135473267081	0.0212382375812298	1	0.828291265667962	FALSE	FALSE
Eubacteriales_[G-2] bacterium_MOT-162 (SP74) 	0.424082614302841	-0.926627397441917	0.939220344357552	1.39170654109214	0.451526222627687	-0.665820968776037	0.651610330008317	0.505525540380771	1	1	FALSE	FALSE
Ralstonia sp._HMT_406 (SP76) 	-0.128246167646093	0.178030166455951	0.681943781819177	1.03122199648235	-0.188059736103143	0.172640000953468	0.850829823821948	0.862934407742846	1	1	FALSE	FALSE
Eubacteriales_[G-4] bacterium_MOT-164 (SP8) 	0.509462963653555	-1.09738809614335	0.933412682104477	1.38355892199455	0.545806772739489	-0.793163253619401	0.585198767247345	0.427682713709812	1	1	FALSE	FALSE
Bradyrhizobium pachyrhizi (SP80) 	-0.241744160929992	0.405026153023748	0.517129634629184	0.800238916882569	-0.467473037207272	0.506131537068427	0.640161478383661	0.612764312560694	1	1	FALSE	FALSE
Akkermansia muciniphila (SP83) 	2.06625819503278	-4.21097855890179	1.04604571098039	1.54165600307685	1.97530392156211	-2.73146444504966	0.0482336684843266	0.00630535440642934	1	0.302657011508608	FALSE	FALSE
Staphylococcus ureilyticus (SP9) 	0.521231447811289	-1.12092506445881	0.481410011876785	0.749880958149522	1.08271833769983	-1.49480401159261	0.278933462016323	0.13496559908203	1	1	FALSE	FALSE
Bifidobacterium pseudolongum (SP93) 	2.07793053282266	-4.23432323448156	1.20538535507574	1.76558049669108	1.72387238991475	-2.39826121913852	0.0847308826609886	0.0164731128935408	1	0.691870741528716	FALSE	FALSE
Oribacterium parvum_nov_89.770% (SPN10) 	0.207791371068097	-0.494044910972429	0.952124068418859	1.40981101107711	0.218239805042598	-0.350433431921471	0.827242272521685	0.726013440041395	1	1	FALSE	FALSE
Fusobacterium varium_nov_96.696% (SPN102) 	0.138476653012102	-0.35541547486044	0.536114774586144	0.826922710093972	0.258296655075399	-0.429804950960956	0.796177967566736	0.667337531116644	1	1	FALSE	FALSE
Duncaniella freteri_nov_93.293% (SPN107) 	2.06785550723057	-4.21417318329737	1.12390371774637	1.65103634216315	1.83988670433175	-2.5524412005226	0.0657848723999106	0.0106970963655998	1	0.472231722274653	FALSE	FALSE
Enterococcus faecalis_nov_95.825% (SPN117) 	-2.89809870126263	5.71773523368903	0.63310739460284	0.962860021211374	-4.57757834763668	5.93828293597189	4.70389636298568e-06	2.88022666266815e-09	0.000277529885416155	1.69933373097421e-07	TRUE	TRUE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_88.867% (SPN118) 	2.31908458289224	-4.71663133462071	1.15870271357685	1.69994698169558	2.00144916872885	-2.77457555171291	0.0453440064632386	0.00552737938625194	1	0.270841589926345	FALSE	FALSE
Duncaniella freteri_nov_89.775% (SPN149) 	1.65118704647159	-3.38083626177942	1.01082377113386	1.49219844907826	1.63350634761925	-2.26567469217502	0.102362546803078	0.0234713081649758	1	0.865235645763813	FALSE	FALSE
Fusicatenibacter saccharivorans_nov_90.526% (SPN15) 	0.207567907287955	-0.493597983412146	0.951801760907378	1.40935877120812	0.218078927580545	-0.350228766085606	0.827367615632275	0.726167019992654	1	1	FALSE	FALSE
Alistipes senegalensis_nov_93.443% (SPN173) 	1.03281420712341	-2.14409058308306	1.01094080818286	1.49236276206305	1.02163667621636	-1.43670871291311	0.306952892190823	0.150800778205516	1	1	FALSE	FALSE
Peptococcus sp._HMT_168_nov_84.866% (SPN178) 	0.624589313145552	-1.32764079512734	1.05015101587432	1.54742157979361	0.594761423551583	-0.857969678375828	0.552002957107214	0.390909206770496	1	1	FALSE	FALSE
Duncaniella freteri_nov_89.718% (SPN181) 	1.17612084323672	-2.43070385530968	1.02200000967537	1.50789003133472	1.1508031625267	-1.61199013508838	0.249813223444786	0.106964086419381	1	1	FALSE	FALSE
Oscillospiraceae_[G-6] bacterium_MOT-153_nov_91.631% (SPN188) 	1.29966319429462	-2.67778855742547	0.804925936113196	1.20342996931899	1.61463699451703	-2.22513035714142	0.106389329110069	0.0260724883627575	1	0.912537092696514	FALSE	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_89.000% (SPN193) 	1.07993679383964	-2.23833575651551	0.978166553613109	1.44635686396675	1.10404183198721	-1.5475681087285	0.269574991894817	0.121726314597509	1	1	FALSE	FALSE
Lachnospiraceae_[G-14] bacterium_MOT-185_nov_92.719% (SPN208) 	-1.27810096993125	2.47773977102627	1.0874107081439	1.59975941326252	-1.17536176566887	1.54882024789791	0.239850013245384	0.121424936734918	1	1	FALSE	FALSE
Actinidia eriantha_nov_97.011% (SPN219) 	-0.711792197509233	1.34512222618223	0.498920070896407	0.774597633316018	-1.42666579083571	1.73654316554496	0.153676250625398	0.0824678388711781	1	1	FALSE	FALSE
Muribaculaceae_[G-2] bacterium_MOT-104_nov_88.423% (SPN29) 	0.523491413183108	-1.12544499520245	0.941612892864055	1.39506320847379	0.555951832382872	-0.806734052167926	0.578243783352929	0.419819721051494	1	1	FALSE	FALSE
Duncaniella freteri_nov_88.934% (SPN33) 	1.72818036866653	-3.53482290616929	1.05356111591566	1.55221095728579	1.6403228465437	-2.27728253661494	0.100938057756426	0.0227693590990477	1	0.865235645763813	FALSE	FALSE
Yaniella halotolerans_nov_97.040% (SPN35) 	1.35528921599294	-2.78904060082212	0.723823036628195	1.08984766934149	1.872404092451	-2.55911048789719	0.0611507192886903	0.0104940382727701	1	0.472231722274653	FALSE	FALSE
Oscillospiraceae_[G-1] bacterium_MOT-147_nov_96.674% (SPN40) 	0.42087461982303	-0.920211408482294	0.897925905057775	1.33378483520126	0.468718652009432	-0.6899249295659	0.639270752935489	0.490241397613252	1	1	FALSE	FALSE
Lachnoclostridium [Clostridium] aminophilum_nov_89.792% (SPN43) 	-0.837410960446906	1.59635975205758	1.12745229062347	1.65602331485041	-0.742746249585269	0.963971785748545	0.457635323099628	0.335060071441678	1	1	FALSE	FALSE
Duncaniella freteri_nov_93.699% (SPN51) 	2.53754379422003	-5.1535497572763	0.90583656700336	1.34487881192398	2.80132629511149	-3.83198077892508	0.00508930315578295	0.000127115672688236	0.25955446094493	0.00661001497978827	FALSE	TRUE
Oscillospiraceae_[G-3] bacterium_MOT-150_nov_92.917% (SPN52) 	0.178126296824643	-0.434714762485521	0.909274501481757	1.34970048529149	0.195899364311182	-0.322082393259004	0.844688934834788	0.747390276307936	1	1	FALSE	FALSE
Muribaculaceae_[G-1] bacterium_MOT-129_nov_88.105% (SPN55) 	1.83757454420631	-3.75361125724886	1.06752181246405	1.57181982272113	1.72134613340109	-2.38806713275229	0.0851880327153145	0.0169372475855177	1	0.691870741528716	FALSE	FALSE
Muribaculaceae_[G-1] bacterium_MOT-129_nov_85.887% (SPN59) 	1.21678937968806	-2.51204092821236	0.69403751874125	1.04815071294263	1.75320403700208	-2.39664095744393	0.0795669903257723	0.0165461279929784	1	0.691870741528716	FALSE	FALSE
Parafannyhessea umbonata_nov_92.161% (SPN67) 	0.162560965853464	-0.403584100543162	0.886734890425969	1.31809203767774	0.18332532937254	-0.30618810295995	0.854542761207804	0.759461430156382	1	1	FALSE	FALSE
Turicibacter sanguinis_nov_95.923% (SPN82) 	-2.06286567600932	4.04726918318241	1.00693105276646	1.48673340994343	-2.04866626204621	2.72225615978888	0.0404947603967984	0.00648378626078061	1	0.302657011508608	FALSE	FALSE
Oscillospiraceae_[G-2] bacterium_MOT-149_nov_95.198% (SPN83) 	0.147028870355918	-0.372519909548072	0.864198699593439	1.28649587997145	0.17013317704029	-0.289561680956444	0.864905402346727	0.772151585746049	1	1	FALSE	FALSE
Staphylococcus saprophyticus_xylosus (SPP1) 	-1.30520712465608	2.53195208047592	0.440637645552638	0.691957291167091	-2.96208718848594	3.65911612291187	0.0030556124451586	0.000253086647079548	0.158891847148247	0.012907419001057	FALSE	TRUE
Sphingomonas aquatilis_melonis (SPP2) 	-1.0000601670929	1.92165816534957	0.426849655863658	0.672182876051742	-2.34288619741171	2.85883237109071	0.0191352187290177	0.00425203409328687	0.956760936450883	0.212601704664344	FALSE	FALSE
Lacticaseibacillus_Lactobacillus casei_rhamnosus (SPP3) 	-0.938569516192565	1.79867686354889	0.900437359340011	1.33730681957321	-1.04234848371963	1.34499939521951	0.297250141564917	0.178625429873611	1	1	FALSE	FALSE
Faecalicatena multispecies_sppn3_2_nov_92.067% (SPPN3) 	0.473378648746918	-1.02521946633007	0.874647964915629	1.30114500996775	0.541221917543227	-0.787936362569979	0.588354632264021	0.430733930249625	1	1	FALSE	FALSE
